openpathsampling.engines.toy.OuterWalls
- class openpathsampling.engines.toy.OuterWalls(sigma, x0)[source]
Creates an x**6 barrier around the system.
\(V(x) = \sum_i sigma_i * (x_i - x0_i)^6\)
- Parameters:
sigma (list of float) – linear scaling of the potential wall
x0 (list of float) – center of the potential
Methods
V(sys)Potential energy
__init__(sigma, x0)args()Return a list of args of the __init__ function of a class
base()Return the most parent class actually derived from StorableObject
count_weaks()Return number of objects subclassed from StorableObject still in memory
dVdx(sys)Derivative of potential energy (-force)
descendants()Return a list of all subclassed objects
from_dict(dct)Reconstruct an object from a dictionary representaiton
get_uuid()idx(store)Return the index which is used for the object in the given store.
kinetic_energy(sys)Default kinetic energy implementation.
objects()Returns a dictionary of all storable objects
reverse_uuid()ruuid(uid)set_observer(active)(De-)Activate observing creation of storable objects
to_dict()Convert object into a dictionary representation
Attributes
ACTIVE_LONGCREATION_COUNTINSTANCE_UUIDbase_clsReturn the base class
base_cls_nameReturn the name of the base class
clsReturn the class name as a string
observe_objects