openpathsampling.high_level.move_strategy.NearestNeighborRepExStrategy
- class openpathsampling.high_level.move_strategy.NearestNeighborRepExStrategy(ensembles=None, group='repex', replace=True)[source]
Make the NN replica exchange scheme among ordered ensembles.
Methods
__init__
([ensembles, group, replace])args
()Return a list of args of the __init__ function of a class
base
()Return the most parent class actually derived from StorableObject
count_weaks
()Return number of objects subclassed from StorableObject still in memory
descendants
()Return a list of all subclassed objects
fix_name
()Set the objects name to be immutable.
from_dict
(dct)Reconstruct an object from a dictionary representaiton
get_ensembles
(scheme, ensembles)Regularizes ensemble input to list of list.
get_parameters
(scheme[, list_parameters, ...])Gather initialization parameters for each mover to be created.
get_per_mover_ensembles
(scheme)Get ensembles for each mover to be created.
get_uuid
()idx
(store)Return the index which is used for the object in the given store.
make_movers
(scheme)Makes the movers associated with this strategy.
named
(name)Name an unnamed object.
objects
()Returns a dictionary of all storable objects
reverse_uuid
()ruuid
(uid)set_observer
(active)(De-)Activate observing creation of storable objects
set_replace
(replace)Sets values for replace_signatures and replace_movers.
to_dict
()Convert object into a dictionary representation
Attributes
ACTIVE_LONG
CREATION_COUNT
INSTANCE_UUID
base_cls
Return the base class
base_cls_name
Return the name of the base class
cls
Return the class name as a string
default_name
Return the default name.
is_named
True if this object has a custom name.
level
The level of this strategy.
name
Return the current name of the object.
observe_objects