openpathsampling.numerics.SparseHistogram

class openpathsampling.numerics.SparseHistogram(bin_widths, left_bin_edges)

Base class for sparse-based histograms.

Parameters:

• bin_widths (array-like) – bin (voxel) size

• left_bin_edges (array-like) – lesser side of the bin (for each direction)

__init__(bin_widths, left_bin_edges)

Methods

__init__(bin_widths, left_bin_edges)
add_data_to_histogram(data[, weights])	Adds data to the internal histogram counter.
compare_parameters(other)	Test whether the other histogram has the same parameters.
empty_copy()	Returns a new histogram with the same bin shape, but empty
histogram([data, weights])	Build the histogram.
map_to_bins(data)
map_to_float_bins(trajectory)
normalized([raw_probability, bin_edge])	Callable normalized version of the sparse histogram.
sum_histograms(hists)
xvals(bin_edge_type)	Position values for the bin