- class openpathsampling.pathmover.SelectionMover(movers)
A general mover that selects a single mover from a set of possibilities
This is a basic class for all sorts of selectors, like RandomChoice, RandomAllowedChoice. The way it works is to generate a list of weights and pick a random one using the weights. This is as general as possible and is chosen because it also allows to store the possibilities in a general way for better comparison
the PathMovers to choose from
list of openpathsampling.PathMover
Return a list of args of the __init__ function of a class
Return the most parent class actually derived from StorableObject
Return number of objects subclassed from StorableObject still in memory
Traverse the tree in post-order applying a function with depth
depth_pre_order(fnc[, level, only_canonical])
Traverse the tree of node in pre-order applying a function
Return a list of all subclassed objects
Set the objects name to be immutable.
Reconstruct an object from a dictionary representaiton
Return the index which is used for the object in the given store.
Return a list of key : subtree tuples
legal_sample_set(sample_set[, ensembles, ...])
This returns all the samples from sample_set which are in both self.replicas and the parameter ensembles.
Traverse the tree in post-order applying a function
Traverse the tree in pre-order applying a function
Apply a function to each node and return a nested tree of results
Run the generation starting with the initial sample_set specified.
Name an unnamed object.
Returns a dictionary of all storable objects
select_sample(sample_set[, ensembles, replicas])
Returns one of the legal samples given self.replica and the ensemble set in ensembles.
(De-)Activate observing creation of storable objects
Return set of replica states that a submover might be called with
Convert object into a dictionary representation
Return the object as a tree structure of nested lists of nodes
Return the base class
Return the name of the base class
Return the class name as a string
Return the default name.
A unique identifier to build the unique key for a position in a tree
List the input -> output relation for ensembles
Return a list of possible used ensembles for this mover
True if this object has a custom name.
Return the current name of the object.
Return a list of possible returned ensembles for this mover
Returns a list of submovers