Networks

Networks represent the collection of path ensembles to be sampled.

Networks can be made under the top-level keyword networks. The following types are available:

tps

Network for transition path sampling (two state TPS or multiple state TPS).

• type - type identifier; must exactly match the string tps (required)

• name (string) - name this object in order to reuse it

• initial_states (list of volume) - initial states for this transition (required)

• final_states (list of volume) - final states for this transition (required)