openpathsampling.snapshot_modifier.NoModification

class openpathsampling.snapshot_modifier.NoModification(as_copy=True)[source]

Modifier with no change: “

Parameters:

as_copy (bool, default True) – if True calls return a copy of the snapshot, else the snapshot itself.

__init__(as_copy=True)[source]

Methods

__init__([as_copy])

apply_to_subset(full_array, modified[, ...])

Replaces elements of full_array according to the subset mask

args()

Return a list of args of the __init__ function of a class

base()

Return the most parent class actually derived from StorableObject

count_weaks()

Return number of objects subclassed from StorableObject still in memory

descendants()

Return a list of all subclassed objects

extract_subset(full_array[, subset])

Extracts elements from full_array according to self.subset_mask

fix_name()

Set the objects name to be immutable.

from_dict(dct)

Reconstruct an object from a dictionary representaiton

get_uuid()

idx(store)

Return the index which is used for the object in the given store.

named(name)

Name an unnamed object.

objects()

Returns a dictionary of all storable objects

probability_ratio(old_snapshot, new_snapshot)

This modifier does not alter the snapshot, so equal probability.

reverse_uuid()

ruuid(uid)

set_observer(active)

(De-)Activate observing creation of storable objects

to_dict()

Convert object into a dictionary representation

Attributes

ACTIVE_LONG

CREATION_COUNT

INSTANCE_UUID

base_cls

Return the base class

base_cls_name

Return the name of the base class

cls

Return the class name as a string

default_name

Return the default name.

is_named

True if this object has a custom name.

name

Return the current name of the object.

observe_objects